生物統(tǒng)計(jì)表達(dá)芯片分析_第1頁
生物統(tǒng)計(jì)表達(dá)芯片分析_第2頁
生物統(tǒng)計(jì)表達(dá)芯片分析_第3頁
生物統(tǒng)計(jì)表達(dá)芯片分析_第4頁
生物統(tǒng)計(jì)表達(dá)芯片分析_第5頁
已閱讀5頁,還剩39頁未讀 繼續(xù)免費(fèi)閱讀

下載本文檔

版權(quán)說明:本文檔由用戶提供并上傳,收益歸屬內(nèi)容提供方,若內(nèi)容存在侵權(quán),請(qǐng)進(jìn)行舉報(bào)或認(rèn)領(lǐng)

文檔簡(jiǎn)介

一 、表 的用 一 物不 或組 表達(dá)差 @研究某 @二、表 簡(jiǎn) Sample

Samplequality

Dataquality 全自 洗滌工作 數(shù)據(jù)分析處理軟件 三、表 數(shù)據(jù)的獲 @自己設(shè)計(jì)實(shí)驗(yàn)并進(jìn)行表 實(shí)@從表 數(shù)據(jù)庫(kù)獲(*.CEL為原始數(shù)據(jù)文件

NCBI,.GEO,.RepositorybrowserSen

GEOPublications Samples t Samples tforms Dataset Advanced 30,918series > Organism(s) ProfileofsmallRNAtranscriptomeduringcorticaldevelopmentinthe Non-codingprofilrngbyhigh

aRattusnorvegi 18暑TX Maojin

Jun26, Expressionprofilingofmiceexposedtomulbiwalledcarbon ExpssionprofilingbyaMus

JamesDenv,

Jun26,2 Tissue-specificCh!P-seqofC.elegansRb/E2F profilrngbyhigh2

acaenorhabd心s

辜BEDGRAPHGFF3Valerie易SRA

Jun26, ExpressiondatafromGW9662treatedFVBwild-typemousem

ExpssionprofilingbyaMusmusculus

辜 RobertI

Jun26,

Dissectingmodesofactionofnon-genotoxiccarcinogensin3mouse3

ExpressionprofilingbyaMus

辜CEL

Jun26,

TargetedRT-PCRassaysspanningunannotatedsplicejunctionssequencedbyRoahe454.

ExpssionprofilingbyaHomosap/enshighthroughput

辜PSL易SRA

Julien

Jun26,

Molecularmech.anismsunderpinningphysiologicaltolerancestosalinityandalkalinesalinityinBrassicajunceaEvidenceofanInceasedPathogenicFootpintintheLingualMic

ExpressionprofilingbyaBrassicaJuncea aBrassicaExpessionpofilirngbya

易 d98 易 BruceJ98

Jun26,Jun26,ofUntreatedHIVInfecl:ed IdentificationAtg5-relatedmicroRNAsinvolvedintheregulationoftumor K.lactismatingtyperegulatorCh!P-

Non-codingprofilrngby

aHomo6aMus6

辜 Yen-Ju易 TrevaSo

Jun26,Jun26,G HandoutI Contact:wuwhlab回IMysubmissionslzlIPag1of1[屯<l1[)網(wǎng)Pagesiz葉百二

Numberof

GSM154508Arabidops1spollentubesGSM154507ArabidopsispollentubesrepGSM154506ArabidopsispollengrainsGSM154505ArabidopsispollengrainsGSM154504Arabidopsismaturepollengrains

RNA1n111RNAin11RNAin11RNAin111

GSM154508.CEL.gzWer-GSM154507.CEL.gzWei-GSM154506.CEL.gzWei-GSM154505.CEL.gzWei-GSM154504.CEL.gzWei-

SepSepSepSepSep1GSM154503Arabidopsis RNAin1maturepollengrainsrepl'"

GSM154503.CEL.gzWei-

SepNLMNIHGEOHelpDisc固merSectionArraExI)Search

ExperimentYotJcanseardhfor tohelpyotJidentifye:xperimentsyotJmightbeinterestedin.Seardh HinTypeinasmanywordsasyouTypeinwordsthatyouthinkarelikelrytobespeoifictowhatyoulooingforratherthanusedaConsiderwordsas "notSearchbyNASCArraysReference

2)1Useadata-miningtoolThereareaurrentl¥thefollowingdataminingtoolsavailable.Allofthesetoolsallowyoutotypeinagene(s)ofinterest,andidentify蚥perimentsorslidesthatyoumightbeinterestedin.OlidkonthelinkstoSpotHistory:Thistoolallowsyoutoseethepatternofgenee:xpressionoverallslidesinthedatabase.巳ntrerReferenceNIumber(e.g.

Easil¥identifyslides(andthereforee:xperimentaltreatments)wheregenesarehighl¥,lowl¥,or(T九num比ra給r咋NASCAR邸YS-prefiXJSS”mnymouSWIth啦E嘩nnntSlideThisseardhallowsyoutoseardhforslidesthatmatdhyourariteria.Type1ntermsyouwishtoseardhfor,andthefieldsyouwishtoseardhforthemin, aonta1nANID aonta1nANID aonta1nANID aonta1nANID aonta1n

unusuall¥Twoge11esea壯erplot:Thistoolallowsyoutosee1dhepatternofgenee:x!Pressionoverallslidesfortwogenesasascatterplot.Ifyouareinterested1ntwogenes,youcanfindoutiftheya改intandem,andhighlightslidesandthereforee:X!PBrimentalaond巾ons)wherethesetwogenesbehaveinanunusualmanner.Ge11eSwi11ger:Ifyouhaveageneofinterest,thistoolwi'IIshowyouwhidhe:x!Perimentthegenee:x!PressionvariedmostBulikGe11eDownload:Thistoolallowsyoudownloadthee:x!Pressionofalistofgenesoveralle)(!perimenl!:s.Youcangetallgenesoveralle:X!PBrimentstheen甘red忒動(dòng)as的fromtheSu;perBulikGe11eDownload.;文件(E)查春OO收惹 工具 申Characteris運(yùn)令Microarray 屯SogouE鄧 etotheRiceExpressionu?DataSearchExpe「imenlsbyResearch

l]RiceEressionD3base(—Search—Search

ceMicroar"yOpeoio,A門ayBLASTRice TheRiceE.xpressionDatabase(RED)isadministrate,dby,GeneexpressionteaminNationalInstituteofAgrobiologicalSciences(NIAS)andMicroarraygroupinSocietyforTechno-innovationofAgriculture, ryandFisheries(STAFF)_REDholdsrawandnormanzeddatafromexpressionprofilesobtainedbytheRiceMicroarrayProjectandotherresearchgroupsllhesedataareopentothepubliclessthanoneyearaftersendingthedataeachresearchgroup_PleaserefertotheRiceMicroarrayOpening

INE?_??

mdgebadceful曰eo,lhcDNADbase??EIO勹rWEIO勹RiceGeoomelotedMpDbONERiceMuntPanelDatabase(To51RiceGenomenotahonDatab3S,(RG豎RMOS:http:llcdna01_dna_affrc_go」p/RMOS/)forfulldetailsofourresearch

壓氣

ntDis-ElementmoterohDb…moreREDInform

Proleome,KikuchiS.TheRiceExpressionDatabase(RED):gatewaytoricefunctionalgenomics.Trends ntScience(2002)Dec7(12):563-

六安

DNAThispageisdesignedforInternetExplorer5.0orWEBmaster:巴 @@ nd @ @ExpressedGenesandChanged@GeneListof@@ @ Correlation Principal ddQ

?· ?·?4?4,心,心1·111·R動(dòng)

1L1LO

`.

11

11

泛.j?.4:.j?.4:f5

L1L1

么——··?··?0d

,■O,■OL1111

1 1

的數(shù)目 列 的數(shù)目 列 差異表達(dá)倍數(shù)(1.2、1.5、ai石節(jié)旮i 氐ii }6II } fi i i;i凜iE

更巳 右1右il0i_

5il gd氣氣50

a i· : 個(gè)POC1uEl}l-sau0矗··個(gè)sapoulUe:J\1ui1s 1

t也zaC-IllNa1--E-g111--

.-.--,I etaI

.

O: ;ue1ni111II之i50

.`藎,q, .`藎FcuFcu

二=一 mE--

3o.28k屆-508-巨

.~ E巴8eks,adAiMOJJVp

lil"il!3ue:i壬Ua

· 后臥汃扒邸邸睪芯立了

dChipSoftware: ysisandvisualizationofgenee.xpressionandSNPmicroarraysNewdChipweb,siteat,GoodeSites(notaccessible

UserH

Searchmanual!,sirte&userdOW配沁沮edmwingWongLab邸disde叫oped年dm血血edbyOhoogLiLabTheourrootupportisNIHgr血tRiOlGM077122.Ne011eDa旮伽o忒rayDataAn啦邇Work如WithDNAC嗣知如eI(dClliUCLAC伽如dM燈O扛myCore,Tll]edayMrhl2`.2Ol2.OtherSo仕 "Combatt:ing'batch沮eotswhm竺些b證ng皿ohesof血cro五aydata酰二Us過Group)Bdornssiar.i扛anslationoninstalation(byM畔aRu述owcBlotic cll、 [time]02nE亡9-S02nE亡9-SN色U[·a:Jeds]OVtP-l)1r,o<liqeiu V9」卜53A. ..,.—-?,'.·., uas3n_(I嘈)一1[asuodsaJ?_?·J-6 -uo

V9-」GE

p.ngbIOloglCIISearchformarkergenes[time)[response]Toolset1:Makebette「senseofyourg1enesof WithGenevestiga[oran啤erquestions 、-卜、-卜--RNA-

·11whicmcan位rs ·11whichgenotypes, Iist

iPaiPa

FINDGENESOF tJARRAY

WithGe11四邸ti{l1a如,idelllitifvProprietaryy yqualifycontrolled

LJOLJO口Your

specificallyexpressedseleci1sdspecificallyrespondingtosieleci創(chuàng)diseasesm氓aions,d「ugs,etc.1s往blyexip·res,sedi1:S 1 —、

-ff

,!

tlssues,cancers,disease,S,eic.莊卜 SImIlcarresponses,tna寧Iih玉叫莊卜Ii寸of

g100g“”“”“uaraeasobAeie“'t“'“'Co吶晌血ItySITEINFONotioe:CollaborationwithCurr,entversion:Lastmaintain:2012-03-Supportedsp己cies:Toolsnumber:Supported,datatypes:TotalIDFinishedjob:5fi221MSU7.0transcriptW,anginSuZhen'slabBugreport:ChunchaoWangOldversion:6a對(duì)GO

etoagriGO-- lysisToolkitandDatabasefo:rAgricultural!CommunitTheagriGOisaweb-basedtoolanddatabaseforthegeneontology ysis.Itsupportsspeaicialfocusonagriculturalspeaiesandisuser-friendly.TheagriGOisdesignedtoprovidedeepsupporttoagriculturalcommunityintherealmofontology ysi,s.ComparedtootheravailableGO ysistools,uniqueadvantagesandfeaturesofagriGOare:. 芒dat:at:ypesourren哥.AndagriGOisdesignedasanl!Jser-friendlywebNewtoolsinal1Jd1ngPAGE(Parametric ysisof?Gene?set:Enridhment),BLAST4ID(TransferIDsbyBLAST)and P/J.JRE(CrosscomparisonofSEA)were?developed.The?arrivaloft:heset:oolsprovides1Jserswithpossibilitiesfordataminingandsystematicres1Ultexploration

溫馨提示

  • 1. 本站所有資源如無特殊說明,都需要本地電腦安裝OFFICE2007和PDF閱讀器。圖紙軟件為CAD,CAXA,PROE,UG,SolidWorks等.壓縮文件請(qǐng)下載最新的WinRAR軟件解壓。
  • 2. 本站的文檔不包含任何第三方提供的附件圖紙等,如果需要附件,請(qǐng)聯(lián)系上傳者。文件的所有權(quán)益歸上傳用戶所有。
  • 3. 本站RAR壓縮包中若帶圖紙,網(wǎng)頁內(nèi)容里面會(huì)有圖紙預(yù)覽,若沒有圖紙預(yù)覽就沒有圖紙。
  • 4. 未經(jīng)權(quán)益所有人同意不得將文件中的內(nèi)容挪作商業(yè)或盈利用途。
  • 5. 人人文庫(kù)網(wǎng)僅提供信息存儲(chǔ)空間,僅對(duì)用戶上傳內(nèi)容的表現(xiàn)方式做保護(hù)處理,對(duì)用戶上傳分享的文檔內(nèi)容本身不做任何修改或編輯,并不能對(duì)任何下載內(nèi)容負(fù)責(zé)。
  • 6. 下載文件中如有侵權(quán)或不適當(dāng)內(nèi)容,請(qǐng)與我們聯(lián)系,我們立即糾正。
  • 7. 本站不保證下載資源的準(zhǔn)確性、安全性和完整性, 同時(shí)也不承擔(dān)用戶因使用這些下載資源對(duì)自己和他人造成任何形式的傷害或損失。

最新文檔

評(píng)論

0/150

提交評(píng)論